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JANAS
JANAS is a command-line toolkit for particle ranking, subset selection and class reassignment in single-particle cryo-EM workflows.
It uses the per-particle Structural Cross-correlation Index (SCI) to rank particles by their contribution to local map quality.
The link to gitlab is here.
Maiorca M, Shekhar Jadhav S, Sweeney A, Marini G, Mulvaney T, Marcia M*, Topf M​*. (2025) Uncovering hidden functional states in cryo-EM datasets with EMPROVE. researchsquare.com/article/rs-6535769/v1 (preprint)
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